FastQCFastQC Report
Mon 25 Mar 2013
86.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 86.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 50051786
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 2869546 5.73315405767938 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 2310287 4.615793330531702 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1704095 3.404663721690171 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1113852 2.2253991096341696 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 647553 1.2937660206570851 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 628824 1.2563467765166263 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 594608 1.187985579575522 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 544346 1.087565586570677 RNA PCR Primer, Index 1 (100% over 25bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 516100 1.031132035927749 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 436382 0.8718609961290891 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 425682 0.8504831376047202 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 391255 0.781700377285238 No Hit
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 318886 0.6371121302244839 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 307989 0.615340679351582 RNA PCR Primer, Index 1 (100% over 26bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 266414 0.5322767103655401 RNA PCR Primer, Index 1 (100% over 29bp)
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 261380 0.5222191272055706 RNA PCR Primer, Index 1 (100% over 25bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 255820 0.5111106324957115 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 248058 0.49560269437737947 RNA PCR Primer, Index 1 (100% over 27bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 247983 0.49545284957463853 No Hit
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 247927 0.49534096545525863 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 242509 0.48451617690525567 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 236147 0.47180534177142053 RNA PCR Primer, Index 1 (100% over 25bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 211736 0.4230338553753107 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 173056 0.3457538957750678 RNA PCR Primer, Index 1 (100% over 26bp)
ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 172592 0.34482685592877743 RNA PCR Primer, Index 1 (100% over 30bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 170241 0.3401297208455259 RNA PCR Primer, Index 1 (100% over 28bp)
CTTCTCACTACTGCACTTGACTATGGAATTCTCGGGTGCCAAGGAACTC 160718 0.32110342675883735 RNA PCR Primer, Index 1 (100% over 26bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACAG 145988 0.2916739075005236 RNA PCR Primer, Index 2 (97% over 35bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 142278 0.2842615845916068 RNA PCR Primer, Index 1 (100% over 34bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 141931 0.2835683026375922 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTCC 141336 0.282379533869181 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 138040 0.27579435427139404 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 137751 0.2752169522981658 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 134575 0.2688715243847642 No Hit
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 126274 0.2522867016174008 RNA PCR Primer, Index 1 (100% over 29bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACAGT 125823 0.2513856348702522 RNA PCR Primer, Index 8 (97% over 36bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 119632 0.23901644588666626 RNA PCR Primer, Index 1 (100% over 27bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 117856 0.2354681209577616 No Hit
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 117032 0.2338218260583149 RNA PCR Primer, Index 1 (100% over 25bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 113446 0.2266572465565964 RNA PCR Primer, Index 1 (100% over 33bp)
ATGAATGGATGAACGAGATTCCCACTGTCCCTGGAATTCTCGGGTGCCA 112798 0.22536258746091498 No Hit
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 110039 0.21985029665075287 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 108324 0.2164238454947442 RNA PCR Primer, Index 1 (100% over 28bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 107648 0.21507324433937283 RNA PCR Primer, Index 1 (100% over 24bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 105400 0.2105818961185521 RNA PCR Primer, Index 1 (100% over 25bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 104399 0.2085819674846368 RNA PCR Primer, Index 1 (100% over 32bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 102635 0.20505761772417072 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTGGAATTCTCGGGTGCCAAGGAACTCCA 97413 0.1946244235919973 RNA PCR Primer, Index 1 (100% over 28bp)
AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 92095 0.1839994281123155 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 90742 0.18129622787086958 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGTGGAATTCTCGGGTG 85011 0.16984608701076123 No Hit
ACCGGGTGCTGTAGGCTTTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 84367 0.16855941963789264 RNA PCR Primer, Index 1 (100% over 31bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 84234 0.16829369485436543 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGATGAAGCACTGTAGCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 83224 0.16627578484412125 RNA PCR Primer, Index 1 (100% over 29bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 82253 0.1643357941313023 RNA PCR Primer, Index 1 (100% over 32bp)
CGCGACCTCAGATCAGATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 81809 0.16344871289907617 RNA PCR Primer, Index 1 (100% over 32bp)
TTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACTC 81016 0.161864353851429 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 77108 0.15405644066327623 RNA PCR Primer, Index 1 (100% over 26bp)
CGCGCATGAATGGATGAACGAGATTCCCACTGTCCCTGGAATTCTCGGG 75269 0.15038224610006923 No Hit
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 75138 0.15012051717794844 RNA PCR Primer, Index 1 (100% over 27bp)
ATCACATTGCCAGGGATTTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 74040 0.14792678926582162 RNA PCR Primer, Index 1 (100% over 31bp)
TTCACAGTGGCTAAGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 73619 0.1470856604397693 RNA PCR Primer, Index 1 (100% over 34bp)
TGAGGTAGTAGATTGTATAGTGGAATTCTCGGGTGCCAAGGAACTCCAG 72423 0.1446961353187277 RNA PCR Primer, Index 1 (100% over 29bp)
CCCCCCACTGCTAAATTTGACTGATGGAATTCTCGGGTGCCAAGGAACT 69436 0.13872831630823323 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 68681 0.1372198786273081 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 68446 0.13675036491205328 RNA PCR Primer, Index 1 (100% over 26bp)
ACCGGGCGGAAACACCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 68308 0.13647465047501003 RNA PCR Primer, Index 1 (100% over 32bp)
ATCCCGGACGAGCCCCCATGGAATTCTCGGGTGCCAAGGAACTCCAGTC 66634 0.13313011447783302 RNA PCR Primer, Index 1 (100% over 31bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 66314 0.13249077665280515 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 65605 0.1310742437842278 RNA PCR Primer, Index 1 (100% over 34bp)
TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG 65518 0.13090042381304837 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 64662 0.1291901951310988 RNA PCR Primer, Index 1 (100% over 31bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 64335 0.12853687179114848 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 63084 0.1260374604814302 No Hit
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATATGGAATTCTCGGGTGCC 62905 0.12567983088555523 No Hit
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 62817 0.12550401298367256 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC 61072 0.1220176239065675 RNA PCR Primer, Index 1 (100% over 26bp)
CCCCCCACTGCTAAATTTGACTGTATGGAATTCTCGGGTGCCAAGGAAC 60793 0.12146020124037132 RNA PCR Primer, Index 1 (100% over 24bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 60771 0.12141624676490065 RNA PCR Primer, Index 1 (100% over 27bp)
ATGAATGGATGAACGAGATTCCCACTGTCCCTATGGAATTCTCGGGTGC 60765 0.12140425918068139 No Hit
GGCCGCCGGTGAAATACCACTACTTGGAATTCTCGGGTGCCAAGGAACT 60754 0.12138228194294605 RNA PCR Primer, Index 1 (100% over 25bp)
AGTAAGGTCAGCTAATTAAGCTATCGGGCCCTGGAATTCTCGGGTGCCA 60751 0.12137628815083641 No Hit
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 60187 0.1202494552342248 RNA PCR Primer, Index 1 (100% over 30bp)
AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC 57676 0.1152326512384593 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 56932 0.11374619079526953 No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 56116 0.11211587934144848 RNA PCR Primer, Index 1 (100% over 26bp)
CTTCTCACTACTGCACTTGACTAGTCTTGGAATTCTCGGGTGCCAAGGA 55449 0.11078325956240603 RNA PCR Primer, Index 1 (100% over 22bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 55000 0.1098861886766638 No Hit
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 52946 0.10578243901226622 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 51030 0.10195440378491188 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATATGGAATTCTCGGGTGCCAAGGAACTCCA 50219 0.1003340819846069 RNA PCR Primer, Index 1 (100% over 28bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 51364275 28.97707 314.10754 28
AATTC 50825315 28.94132 317.48563 26
ATTCT 50630950 27.790625 306.03793 27
TGCCA 49264005 24.672226 277.3084 36
TCTCG 50519705 24.388403 268.68497 29
GAATT 50899310 23.26014 255.38434 25
GCCAA 44359400 23.04731 287.7654 37
CCAAG 43416090 22.557207 287.60812 38
AACTC 36570710 22.204386 335.63074 44
GAACT 43881815 21.382187 269.45834 43
CTCGG 50231820 20.7506 229.76324 30
GGAAT 50834715 19.878792 218.44624 24
TGGAA 50347055 19.688095 218.26976 23
GTGCC 46802050 19.333775 228.883 35
ACTCC 30942790 19.309717 344.7253 45
CAAGG 42683970 17.797604 230.7244 39
AAGGA 42290515 17.156496 224.79128 40
GGAAC 40643420 16.946772 230.61961 42
AGGAA 41316435 16.76133 224.73033 41
TCGGG 50054575 16.594254 184.39273 31
CGGGT 49686765 16.472315 184.10153 32
GGTGC 48795500 16.17684 184.03574 34
GGGTG 49565590 13.187314 147.74043 33
CTCCA 18921640 11.807969 114.550125 45
CCAGT 15657870 7.8417187 78.833176 7
TCCAG 15636800 7.8311667 63.734047 45
TTGGA 20648355 7.7832155 129.72629 22
CAGTC 10716830 5.367164 36.044827 44
ATGGA 12858525 5.0282955 58.936974 22
AGTCA 9277575 4.5206614 35.090794 45
TCACA 7345650 4.4600077 41.376724 2
GACTG 9396235 3.776544 93.494514 11
CTGGA 9263835 3.7233303 25.170591 23
TTATC 6687555 3.670706 126.58516 5
GTGGA 11197720 3.611873 19.688368 23
TGATG 9402315 3.5441198 87.18619 14
GTCAC 7014985 3.5132198 31.925655 44
TCAGA 7075800 3.4478078 121.92221 8
TGTTG 9369670 3.4044101 82.50837 17
TATCA 5868885 3.3419032 131.32451 6
GTTGA 8476095 3.1949892 77.1052 18
ACTGA 6352120 3.095182 112.68803 12
CTGAT 6510175 3.0577652 108.61814 13
CAGAC 5841920 3.0352201 119.9934 9
ATCAG 5996140 2.9217246 112.63424 7
CACAG 5595315 2.9070947 27.941595 3
CTTAT 5293450 2.9055011 126.51771 4
AGACT 5961365 2.90478 112.75402 10
CTTGG 7486425 2.9004085 20.791935 21
CAGTT 6000340 2.8183007 73.8159 8
AGCTT 5880550 2.7620366 108.360435 2
GTAGT 7232860 2.726363 68.728806 5
TAGCT 5705875 2.6799934 108.32774 1
ACTGT 5703035 2.6786594 71.25905 18
GCTTA 5339445 2.5078845 108.315056 3
TTGAC 5251360 2.4665122 43.668804 19
TGACT 5146855 2.417427 38.27921 18
ACTTG 5131115 2.4100342 28.479847 7
TTTGG 6594255 2.395981 46.655552 21
ATGTT 5436365 2.3947103 101.31844 16
AGAAC 4538780 2.294366 79.401634 15
CCCCC 3306015 2.2609944 44.20551 1
ACAGT 4623100 2.2526865 25.22617 4
AACTG 4547260 2.2157323 74.38363 17
GATGT 5877930 2.215634 87.07919 15
AAGAA 4482295 2.2045143 77.72605 14
CTGTT 4637590 2.0996542 72.28047 19
AAGCT 4257400 2.074493 76.92181 1
AGGTA 5242900 2.0502234 72.96475 3
GTTGG 6584780 2.0473309 49.809776 21
TAGTA 4425330 2.0223022 83.27169 6
AGTTG 5341810 2.0135484 59.251137 9
CTGCC 3840550 1.9768927 81.09673 4
AGTAG 4986680 1.9500294 70.99764 7
GGTAG 6008880 1.9381901 59.692238 4
TTGAA 4118820 1.8822321 72.21015 11
AGCTG 4617780 1.8559827 63.099045 2
AGATT 4059460 1.8551059 56.62606 10
GCCAG 4206010 1.8025117 67.51764 6
TAGTT 4090195 1.8017246 63.940647 18
CCACT 2815995 1.7573098 32.672943 5
GTAGA 4470220 1.7480688 48.8561 8
TTGTA 3950245 1.7400768 69.45557 13
TGTAT 3920440 1.7269477 66.456116 14
ACTGG 4282600 1.7212667 21.98782 22
ATAGT 3682130 1.682672 69.26277 17
TGAAG 4301095 1.6819329 61.79616 12
GATGG 5149015 1.6608372 40.21293 21
CCCAC 2482690 1.6519848 35.20561 4
GAAGA 4064595 1.6489327 63.988964 13
AGTGG 5059755 1.632046 18.240952 14
GCACT 3235740 1.6205118 30.630337 5
CACTT 2767235 1.6195538 35.048004 6
TATAG 3537405 1.6165354 66.87618 16
GTATA 3535885 1.6158406 67.47912 15
GTTTG 4443250 1.6144267 43.28958 20
TGTGG 5184790 1.6120479 14.851605 22
GCTGC 3755465 1.5513701 64.82758 3
GATTG 4098345 1.5448352 47.477455 11
TGAGG 4788455 1.5445368 58.764534 1
ATTGT 3500830 1.5421101 54.545704 12
GAGGT 4715575 1.5210292 60.423683 2
GCTAA 3102380 1.5116891 50.15111 10
TAGAT 3203060 1.463745 56.40042 9
AGTTT 3229865 1.4227506 44.605907 19
CTGTG 3573605 1.3844945 17.664356 21
CCTGG 3280735 1.355261 5.985697 30
AATGG 3403490 1.3309267 8.871421 29
CACTG 2656410 1.3303738 26.34081 6
TAGTG 3463895 1.3056847 16.320623 15
TTGAT 2918675 1.2856717 48.113083 19
ACTGC 2551380 1.277773 26.271639 7
TCCCG 2455690 1.2640469 26.183064 12
GCTTG 3240350 1.255384 19.194315 20
CCCCA 1857230 1.235803 35.99142 3
CGTGG 3705980 1.2286183 9.472363 19
CATGG 3041950 1.2226236 5.57988 16
TGCAC 2427555 1.2157595 31.08053 4
GCCTG 2931495 1.210991 20.891457 17
GTTCC 2496830 1.2053455 14.308258 15
TCTGA 2561795 1.20325 5.1949472 3
AGTTC 2533345 1.1898874 19.480528 14
GCTGT 2970265 1.150747 11.860961 11
TCTCA 1919305 1.1232936 20.212902 25
ATGAA 2329400 1.1043341 8.473858 9
CCTGT 2270260 1.0959687 23.073582 18
CACTA 1787460 1.0852797 17.738865 6
CTACT 1844990 1.0798001 17.351309 8
TTCAA 1869550 1.0645728 28.223782 1
GCTGG 3169980 1.0509218 14.603707 2
ATTTG 2375355 1.0463401 23.181318 15
GGCTT 2671290 1.0349175 18.934544 19
GACTT 2193765 1.0303898 12.658731 5
AAATT 1842670 1.0208801 29.048105 13
TAAAT 1840645 1.0197582 28.776302 12
ATTGC 2165465 1.0170976 29.424637 2
CTGCT 2102760 1.015108 25.364548 8
AATTT 1855855 0.99109477 27.950989 14
TTCCC 1639485 0.98620653 6.3218603 19
CTAAA 1652670 0.9762936 30.692339 11
GTCCC 1896515 0.9762161 26.157593 11
AATCC 1603380 0.9735132 23.39379 8
TATGG 2548410 0.9606007 12.75616 22
ACTAC 1574370 0.95589936 17.764647 7
CCCGG 2152385 0.94806665 22.39613 13
CAGTG 2337260 0.9393938 21.553692 5
AGGCT 2272090 0.91320074 16.256586 18
CCGTG 2204230 0.91056025 10.637475 18
TTTGA 2042160 0.8995683 22.908127 16
TGTCC 1855605 0.8957939 23.889446 10
AAGTA 1869780 0.88643515 23.530085 4
ATACC 1427980 0.8670168 6.793889 19
GTTAT 1965390 0.8657512 16.484388 21
TGAAT 1872055 0.85549796 5.834812 2
CTGTC 1771200 0.85504735 14.531195 12
TTGCA 1816550 0.8532157 29.432322 3
GTGGT 2738515 0.8514555 14.9329605 15
CCAGG 1945045 0.8335611 16.761799 11
TGGCT 2133090 0.8264068 20.488487 8
TCCCA 1318465 0.8227825 10.250543 9
GGCCT 1990400 0.8222278 21.043108 16
GGCTG 2478195 0.8215791 14.36318 1
CCCTG 1585795 0.81627536 5.006635 2
CTGTA 1731225 0.8131394 9.12096 19
CCGGC 1843665 0.8120839 22.322514 14
GACCT 1614835 0.8087359 10.552287 4
TGCTA 1719550 0.80765575 24.330748 9
GAATG 2061020 0.80595696 5.092881 3
ACCAC 1237805 0.8013545 6.019678 16
CAGGA 1906155 0.7947946 20.81965 12
TCTGG 2049770 0.79412675 5.150249 8
AACAT 1338055 0.79043883 17.257019 1
CCATG 1576130 0.7893518 5.2535586 16
CGGCC 1780545 0.7842812 22.325087 15
CACGT 1561120 0.7818346 12.694482 23
AGGAT 1994765 0.7800481 19.473614 13
TTGTC 1718660 0.7781179 27.167837 9
GGCTA 1929010 0.7753097 20.82697 9
ACATT 1361030 0.77500755 16.668566 2
CTTCT 1362425 0.7686098 16.672276 1
TGCTG 1982540 0.76808035 7.3384657 16
TACTG 1632730 0.7668773 13.905745 9
ATCAC 1258765 0.76427567 15.741807 21
CATTG 1625585 0.76352125 9.34983 5
CTTGT 1685885 0.76327914 27.194113 8
TTCAC 1302020 0.7620211 30.51089 1
CAAGT 1557590 0.75896305 24.16636 3
TGAAC 1535480 0.74818957 6.7016993 10
GATGA 1852235 0.72431207 8.9117155 8
TCCTT 1273815 0.7186206 9.702702 11
CTAAG 1473495 0.71798635 24.51152 11
TAAGT 1566460 0.7158461 22.951609 12
TATTG 1624550 0.71561176 22.893595 1
GTAAT 1563355 0.7144272 22.708376 6
CCTTG 1471490 0.71036226 6.1206274 31
CGTTC 1469770 0.70953184 12.056799 25
CTCAC 1132395 0.7066663 18.298716 4
AGTAA 1490465 0.7066075 23.41446 5
TGTAG 1852530 0.6982949 10.857352 11
TAGGC 1731310 0.6958499 16.21988 17
TTTTG 1597225 0.67819476 7.635726 14
CTTGA 1439215 0.67598516 13.968026 16
CGCCT 1311375 0.67501986 12.621405 29
TCCGT 1395060 0.67346567 12.849211 4
CGACC 1256810 0.67114335 10.752629 3
ATCCC 1070265 0.66789436 17.03188 8
CCCAA 1030525 0.6671615 12.098435 10
ATCTC 1135625 0.6646367 20.321054 24
TCCGA 1326130 0.66414773 22.481937 7
TCGGT 1707600 0.6615625 11.432371 15
AAGCA 1306345 0.660361 9.548587 14
ACGTT 1396835 0.65607965 11.747963 24
TCACT 1120120 0.6555622 17.065138 5
TGAGT 1733760 0.65352553 13.490724 18
GTGCT 1680075 0.65089864 7.3745165 15
TTCCG 1343960 0.6487971 12.85943 3
ATTCC 1107555 0.6482084 6.1467505 18
GCCCA 1191595 0.6363182 7.631963 11
TCAAG 1303655 0.6352288 24.119488 2
ATAGG 1617755 0.6326192 21.503796 16
AAGTT 1382605 0.63182753 20.726723 13
CTGGT 1624310 0.6292941 17.096952 3
GAAGG 1876495 0.62792283 12.214203 10
TAATC 1097950 0.6252027 21.936508 7
TAGAA 1315900 0.62384874 9.833859 10
TTCTG 1371670 0.62101924 5.7032657 16
CAAAG 1223160 0.61831075 10.970098 1
CCGAA 1183330 0.61480933 19.392574 8
GGTCC 1484725 0.6133351 18.809124 5
GTGGC 1833625 0.6078892 18.135386 7
CTCAA 998505 0.6062554 20.821653 26
AAAGC 1198045 0.605615 9.586906 13
CTCAG 1207265 0.6046182 10.083723 7
GTCCG 1460645 0.6033878 18.875185 6
ATCCA 991825 0.60219955 23.223204 9
TGGTC 1547575 0.5995651 17.347614 4
ACTAG 1228770 0.59873974 9.161501 20
TTGTG 1642655 0.5968483 8.002258 19
GACTA 1223830 0.59633267 14.352649 19
CAGAA 1171000 0.59194374 13.228887 15
TGGTT 1629055 0.5919067 11.969672 16
GATAG 1512400 0.5914204 20.9594 15
AATAC 999580 0.5904891 5.564153 13
AGTGA 1500770 0.5868725 14.017408 16
GGACT 1457615 0.58584607 11.248306 4
AACGC 1123640 0.5837969 14.783315 8
ATTCA 1023005 0.582527 16.659836 4
AGAAT 1227785 0.58207476 8.336653 4
TCGCC 1127595 0.5804206 13.125236 28
CCAAA 919195 0.5789873 10.266407 11
GGATA 1475285 0.5769067 19.270508 14
AAAGT 1214845 0.5759401 9.0898695 6
GTAGG 1772925 0.5718646 11.188433 8
AGTTA 1249860 0.57116526 16.113384 20
TCCCT 947990 0.57024854 5.3929076 28
GTCGG 1719995 0.57021827 10.039013 14
CCCAT 912710 0.5695728 11.455701 1
AAAGA 1151985 0.56657743 8.643881 2
TGAAA 1194875 0.5664726 5.25733 10
CGGTG 1700225 0.563664 10.036217 16
AACGA 1111995 0.56211656 5.575145 12
AAGGT 1436455 0.5617223 13.989821 11
CCGGG 1586390 0.5607781 5.5062947 2
GTGAG 1726550 0.55690616 11.565766 17
AGAAA 1130270 0.5558974 9.288051 11
TACCA 914080 0.55499566 5.6081057 15
CAACG 1065395 0.5535352 13.794942 7
CCGCC 1002125 0.55002016 6.267798 3
GAGTT 1455420 0.54860777 13.537104 19
TCAAT 962955 0.54833287 19.536303 27
CATTC 936220 0.5479327 17.384573 3
AAATA 950490 0.54629946 9.24607 12
TGTCT 1203790 0.5450121 5.2407804 10
CGCTG 1316910 0.54401124 11.210491 10
TTCCA 923930 0.54073983 5.9387493 45
TATCT 972920 0.5340223 19.168093 23
ACCTC 852520 0.5320115 13.065415 5
CGGAA 1270955 0.52994025 7.081351 4
AGCAC 1019965 0.52993166 9.158448 15
AGGTT 1405595 0.52982664 12.39841 10
AGCAG 1266525 0.5280931 6.9732065 16
ATCTG 1102905 0.51802367 5.8886814 7
ACATC 851525 0.51701456 13.2581215 6
TCAGT 1091030 0.5124461 9.269262 12
CCATA 843400 0.5120814 11.3293085 2
GTTGT 1409170 0.51201296 10.359194 12
ACATG 1049505 0.51138973 6.2472115 22
GGGCT 1539290 0.51031035 5.6705174 18
TAGGT 1347050 0.5077586 12.203309 9
TCGCT 1049025 0.50641716 5.8392563 11
AAACA 824335 0.50518924 13.407933 4
GGTTA 1328035 0.5005911 12.428131 17
CTGCA 997665 0.49964708 14.731854 11
TTTGT 1162665 0.49367708 11.544185 12
GGATT 1284985 0.48436376 7.187474 14
CAATG 993760 0.484227 10.555599 28
CTCCT 801625 0.48220497 10.370459 10
GAAAG 1183125 0.47997245 7.737689 12
TCTCC 795980 0.4788093 10.647711 9
CTTTT 900240 0.47630432 9.255576 13
TCAAC 782420 0.47505656 16.39015 6
GGTGA 1469690 0.47405484 8.486912 17
ACGGA 1131115 0.47163224 7.501088 3
CGAAG 1127250 0.47002068 15.145871 9
GTTCG 1212180 0.46962565 9.675491 26
GTCAG 1155400 0.46437955 10.65135 13
GTAAA 971805 0.46071836 10.517521 2
CAGAT 940030 0.4580461 9.671611 9
GGTTG 1447020 0.4499055 10.276861 11
TTTCC 786105 0.44347987 14.704335 2
CTGGC 1072600 0.4430876 5.4435143 9
CCTCA 707535 0.44153422 12.392443 6
CTAGT 937185 0.44018662 8.420304 21
GCAGC 1020690 0.43742302 6.9173284 17
CACAT 720070 0.43719992 10.222965 3
CCTTT 763720 0.43085137 9.694452 12
GTCGC 1039015 0.42921376 5.1981044 10
CCCCG 779090 0.42760658 6.3369727 10
ACCGG 993585 0.425807 5.6562777 1
ACCCT 682045 0.4256273 5.46046 21
GATTT 961065 0.42334765 8.861615 15
GAATC 867615 0.42276067 8.193591 6
TGGAC 1050960 0.42240292 10.963734 3
CAGCT 843385 0.42238107 9.179815 18
TGTAA 922945 0.42177048 10.162873 1
GCTAC 842165 0.42177004 8.228787 2
GATCA 861235 0.4196519 9.539973 11
CCCAG 775655 0.41420397 5.273829 32
AGCTA 849180 0.41377786 8.045297 1
TAAAC 695435 0.41081932 13.052643 3
AGACC 782300 0.40645078 7.8567123 4
AGCCC 758220 0.4048936 8.555087 10
TGACA 824080 0.40154743 5.5722675 20
ATAAA 695455 0.39971668 10.565893 4
CTACA 657440 0.39917332 9.934592 3
GCGAC 931075 0.39901796 8.465765 2
AAAAG 806700 0.39675692 8.332959 13
CATAA 669940 0.39575842 10.868865 3
CAAAA 642530 0.39377102 10.376309 12
AGAAG 967340 0.3924324 10.571378 16
TAATT 725145 0.3872541 6.127696 7
CCGTA 772720 0.38699088 13.261044 5
CATCT 660990 0.38685143 6.8306327 6
CAGGG 1120500 0.38537344 5.9860635 11
ACGCT 767240 0.3842464 13.423597 9
CATCC 614385 0.38340437 13.481535 7
TCCCC 594345 0.38121164 7.194392 9
CGACT 760425 0.38083336 6.7306676 13
GACCC 708430 0.37830546 6.0798764 24
GCATT 804650 0.37793618 6.1517696 1
CCCGC 687645 0.3774166 5.024815 26
GCCTT 779550 0.37632802 6.1697783 30
ATCCT 633360 0.37068072 6.4995494 8
AAGGC 887745 0.37015617 6.6713824 18
AGATC 756010 0.36837918 9.448999 10
GTTTC 810940 0.36715052 11.851326 1
CTAGA 751695 0.3662766 7.1522427 2
CAGCA 678230 0.35238028 6.813839 4
TAAAG 742810 0.35215527 8.711076 5
TTCGC 719850 0.3475078 12.2632265 27
TGTTT 817725 0.3472127 5.738397 19
GACAT 708985 0.3454654 5.5806866 21
TCACG 688095 0.3446093 12.697867 22
ACCCG 644755 0.34430265 5.8878846 25
GAGTC 851385 0.34218955 10.690587 11
CGTAG 844830 0.3395549 10.732901 6
TGTCG 872055 0.3378536 11.372325 13
TGGAG 1038735 0.33504844 8.744237 9
TTCAG 708190 0.3326299 6.236068 10
TTATG 754920 0.33254108 5.8656807 21
TACAT 581925 0.33136398 9.222764 4
ACGTG 814740 0.3274611 5.6052856 17
CGCGA 761650 0.32640988 8.582259 1
AGTGT 864930 0.32602778 9.965873 9
GGAGT 1007985 0.32512987 8.711004 10
TACCC 519455 0.3241637 5.550883 20
CCGAC 601235 0.32106274 6.208177 12
TAGAC 658655 0.3209412 7.1804357 3
CTCGC 619515 0.31889042 6.2135296 26
TGCCC 617495 0.31785068 5.012646 30
AAGAT 647755 0.3070911 6.82403 16
TGGTA 813340 0.30658135 5.3157554 16
GTGTA 809555 0.30515462 10.194802 10
GGTTC 777540 0.30123636 5.2333 9
CCCGA 560390 0.2992513 6.099468 11
TGGGC 901955 0.29901898 5.8783545 17
AGACG 717035 0.29897654 6.3022842 15
AACGG 696655 0.29047883 7.523768 2
AGGGA 859090 0.28747335 5.7855053 12
GGGAT 860995 0.27771765 5.552641 13
GTCTC 569535 0.2749432 5.2826195 11
CTAGC 545155 0.2730226 7.0476785 8
GACGT 670365 0.26943377 6.053354 16
GTTCT 583375 0.2641212 5.5057726 15
TTGCC 540380 0.2608686 8.175263 7
TTGGG 800520 0.2488966 5.580359 16
GTTCA 526665 0.2473694 6.233321 10
TAGCC 491105 0.24595344 7.095669 9
TGTGC 626295 0.24264067 7.254601 14
ACCTA 390980 0.23738863 8.502855 6
AGATA 474395 0.22490369 5.540272 17
CATAG 448925 0.21874659 5.470066 16
CCTAG 420220 0.2104531 7.0337095 7
CAATT 355740 0.20256804 5.502191 28
TAGCA 408720 0.19915599 6.04902 1